Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine o-acetyltransferase meta | C1O30_RS18645 | Not Available | Negative | 4160436 - 4161365 | 35547.3 |
| is200/is605 family transposase | C1O30_RS18650 | Not Available | Negative | 4161875 - 4162312 | 17338.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4162477 - 4162592 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4162719 - 4165624 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4165793 - 4165868 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4165985 - 4166061 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4166131 - 4167673 | Not Available |
| gamma carbonic anhydrase family protein | C1O30_RS18685 | Not Available | Positive | 4168137 - 4168682 | 19678.8 |
| duf1488 domain-containing protein | C1O30_RS18690 | Not Available | Negative | 4168722 - 4168994 | 10887.7 |
| shikimate dehydrogenase | C1O30_RS18695 | Not Available | Negative | 4168991 - 4169818 | 29667.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
