Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease tldd | C1O30_RS01485 | Not Available | Positive | 330628 - 332073 | 51181.8 |
| hth-type transcriptional activator aaer | C1O30_RS01490 | Not Available | Negative | 332172 - 333116 | 35200.5 |
| p-hydroxybenzoic acid efflux pump operon protein aaex | C1O30_RS01495 | Not Available | Positive | 333461 - 333664 | 7739.99 |
| p-hydroxybenzoic acid efflux pump subunit aaea | C1O30_RS01500 | Not Available | Positive | 333717 - 334619 | 33065.5 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | C1O30_RS01505 | Not Available | Positive | 334632 - 336584 | 71175.6 |
| duf1543 domain-containing protein | C1O30_RS01510 | Not Available | Negative | 336597 - 337097 | 18944.4 |
| lyse family translocator | C1O30_RS01515 | Not Available | Positive | 337213 - 337839 | 22156.6 |
| ribosome biogenesis factor yjga | C1O30_RS01520 | Not Available | Negative | 337900 - 338448 | 20984.9 |
| metalloprotease pmba | C1O30_RS01525 | Not Available | Positive | 338639 - 339979 | 47854.9 |
| nucleoside diphosphate kinase regulator | C1O30_RS01530 | Not Available | Negative | 340042 - 340452 | 15160.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
