Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate reductase | C1O30_RS18035 | Not Available | Negative | 4009977 - 4010798 | 28776.5 |
| ribonucleoside hydrolase rihc | C1O30_RS18040 | Not Available | Negative | 4011004 - 4011921 | 32923.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | C1O30_RS18045 | Not Available | Negative | 4011994 - 4012944 | 34461.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | C1O30_RS18050 | Not Available | Negative | 4012941 - 4013399 | 16190.3 |
| signal peptidase ii | C1O30_RS18055 | Not Available | Negative | 4013403 - 4013909 | 18497.7 |
| isoleucine--trna ligase | C1O30_RS18060 | Not Available | Negative | 4013909 - 4016734 | 104717.0 |
| bifunctional riboflavin kinase/fad synthetase | C1O30_RS18065 | Not Available | Negative | 4016769 - 4017710 | 34244.6 |
| 30s ribosomal protein s20 | C1O30_RS18075 | Not Available | Positive | 4018107 - 4018370 | 9822.03 |
| transcriptional activator nhar | C1O30_RS18080 | Not Available | Negative | 4018450 - 4019340 | 33605.7 |
| na+/h+ antiporter nhaa | C1O30_RS18085 | Not Available | Negative | 4019384 - 4020559 | 41585.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
