Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1O30_RS17935 | Not Available | Positive | 3985617 - 3986177 | 20999.2 |
| hypothetical protein | C1O30_RS17940 | Not Available | Positive | 3986181 - 3986747 | 21394.0 |
| hcp family type vi secretion system effector | C1O30_RS17945 | Not Available | Negative | 3986815 - 3987294 | 18352.7 |
| dna polymerase ii | C1O30_RS17950 | Not Available | Positive | 3987472 - 3989844 | 91131.9 |
| rna polymerase-associated protein rapa | C1O30_RS17955 | Not Available | Positive | 3990108 - 3993011 | 110052.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | C1O30_RS17960 | Not Available | Positive | 3993074 - 3993727 | 24710.0 |
| co-chaperone djla | C1O30_RS17965 | Not Available | Negative | 3993854 - 3994813 | 36188.4 |
| lps assembly protein lptd | C1O30_RS17970 | Not Available | Positive | 3994964 - 3997363 | 90840.5 |
| peptidylprolyl isomerase sura | C1O30_RS17975 | Not Available | Positive | 3997462 - 3998754 | 47193.4 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | C1O30_RS17980 | Not Available | Positive | 3998754 - 3999755 | 35706.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
