Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase 3 large subunit | C1O30_RS17840 | Not Available | Negative | 3964051 - 3965772 | 62652.8 |
| amp-dependent synthetase/ligase | C1O30_RS17845 | Not Available | Negative | 3966152 - 3967957 | 68460.6 |
| leu operon leader peptide | C1O30_RS21915 | Not Available | Positive | 3968189 - 3968272 | 2935.7 |
| 2-isopropylmalate synthase | C1O30_RS17850 | Not Available | Positive | 3968366 - 3969940 | 57592.6 |
| 3-isopropylmalate dehydrogenase | C1O30_RS17855 | Not Available | Positive | 3969940 - 3971031 | 39375.0 |
| 3-isopropylmalate dehydratase large subunit | C1O30_RS17860 | Not Available | Positive | 3971034 - 3972434 | 49732.4 |
| 3-isopropylmalate dehydratase small subunit | C1O30_RS17865 | Not Available | Positive | 3972446 - 3973048 | 22397.4 |
| siderophore-interacting protein | C1O30_RS17870 | Not Available | Negative | 3973112 - 3974014 | 33053.6 |
| tryptophanase leader peptide | C1O30_RS17875 | Not Available | Positive | 3974252 - 3974362 | 4363.25 |
| tryptophanase | C1O30_RS17880 | Not Available | Positive | 3974461 - 3975861 | 52279.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
