Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| baseplate j/gp47 family protein | C1O30_RS17445 | Not Available | Positive | 3864535 - 3868659 | 154293.0 |
| hypothetical protein | C1O30_RS17450 | Not Available | Positive | 3868711 - 3869538 | 30851.4 |
| hypothetical protein | C1O30_RS17455 | Not Available | Positive | 3869541 - 3871997 | 93224.1 |
| contractile injection system tape measure protein | C1O30_RS17460 | Not Available | Positive | 3871994 - 3875839 | 144116.0 |
| hypothetical protein | C1O30_RS17465 | Not Available | Positive | 3875898 - 3878360 | 91822.4 |
| laci family dna-binding transcriptional regulator | C1O30_RS17470 | Not Available | Negative | 3878414 - 3879451 | 37906.3 |
| carbohydrate abc transporter permease | C1O30_RS17475 | Not Available | Negative | 3879452 - 3880501 | 39243.1 |
| carbohydrate abc transporter permease | C1O30_RS17480 | Not Available | Negative | 3880517 - 3881518 | 37069.0 |
| abc transporter atp-binding protein | C1O30_RS17485 | Not Available | Negative | 3881534 - 3882634 | 41185.9 |
| glycoside hydrolase family 105 protein | C1O30_RS17490 | Not Available | Negative | 3882681 - 3883784 | 40881.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
