Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secondary thiamine-phosphate synthase enzyme yjbq | C1O30_RS17325 | Not Available | Negative | 3840498 - 3840917 | 15905.9 |
| excinuclease abc subunit uvra | C1O30_RS17335 | Not Available | Negative | 3841340 - 3844171 | 104128.0 |
| single-stranded dna-binding protein | C1O30_RS17340 | Not Available | Positive | 3844414 - 3844962 | 19465.7 |
| is3 family transposase | C1O30_RS17345 | Not Available | Positive | 3845210 - 3846330 | 43024.8 |
| antiviral reverse transcriptase drt3a | C1O30_RS17355 | Not Available | Positive | 3846567 - 3847916 | 51880.0 |
| antiviral reverse transcriptase drt3b | C1O30_RS17360 | Not Available | Positive | 3847909 - 3849951 | 79605.5 |
| dead/deah box helicase | C1O30_RS17370 | Not Available | Negative | 3850677 - 3853832 | 118447.0 |
| hachiman antiphage defense system protein hama | C1O30_RS17375 | Not Available | Negative | 3853822 - 3854640 | 31392.9 |
| flavin reductase family protein | C1O30_RS17380 | Not Available | Negative | 3854999 - 3855574 | 21008.8 |
| nad-dependent dehydratase | C1O30_RS17385 | Not Available | Negative | 3855617 - 3856246 | 22558.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
