Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | C1O30_RS17170 | Not Available | Positive | 3800753 - 3801763 | 36791.3 |
| diaminopimelate decarboxylase | C1O30_RS17175 | Not Available | Negative | 3801778 - 3803040 | 45907.7 |
| lysr family transcriptional regulator | C1O30_RS17180 | Not Available | Positive | 3803153 - 3804088 | 34561.7 |
| abc transporter atp-binding protein | C1O30_RS17185 | Not Available | Negative | 3804099 - 3805091 | 36346.1 |
| abc transporter permease | C1O30_RS17190 | Not Available | Negative | 3805167 - 3805949 | 28854.3 |
| abc transporter permease | C1O30_RS17195 | Not Available | Negative | 3805970 - 3806812 | 31145.7 |
| alkaline phosphatase family protein | C1O30_RS17200 | Not Available | Negative | 3806809 - 3807633 | 30855.6 |
| abc transporter substrate-binding protein | C1O30_RS17205 | Not Available | Negative | 3807655 - 3808707 | 38105.1 |
| utra domain-containing protein | C1O30_RS17210 | Not Available | Positive | 3808976 - 3809683 | 27230.7 |
| hypothetical protein | C1O30_RS17215 | Not Available | Negative | 3809809 - 3810228 | 14849.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
