Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid-associated protein hu-alpha | C1O30_RS01280 | Not Available | Positive | 284297 - 284569 | 9534.48 |
| duf1481 domain-containing protein | C1O30_RS01285 | Not Available | Positive | 284574 - 285284 | 26624.8 |
| is4 family transposase | C1O30_RS01290 | Not Available | Negative | 285370 - 286692 | 50539.4 |
| phosphoribosylamine--glycine ligase | C1O30_RS01295 | Not Available | Negative | 286810 - 288099 | 45499.1 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | C1O30_RS01300 | Not Available | Negative | 288115 - 289704 | 57424.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 290313 - 291855 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 291942 - 292017 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 292210 - 295115 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 295242 - 295357 | Not Available |
| amino acid abc transporter atp-binding protein | C1O30_RS01330 | Not Available | Negative | 295782 - 296543 | 28565.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
