Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter substrate-binding domain-containing protein | C1O30_RS16415 | Not Available | Negative | 3624911 - 3625702 | 28353.5 |
| murr/rpir family transcriptional regulator | C1O30_RS16420 | Not Available | Negative | 3625978 - 3626817 | 31834.5 |
| gamma-glutamyltransferase family protein | C1O30_RS16425 | Not Available | Positive | 3627044 - 3628633 | 56298.2 |
| oxalurate catabolism protein hpxx | C1O30_RS16430 | Not Available | Positive | 3628661 - 3628858 | 7513.01 |
| atze family amidohydrolase | C1O30_RS16435 | Not Available | Positive | 3628855 - 3630267 | 49856.3 |
| oxalurate catabolism protein hpxz | C1O30_RS16440 | Not Available | Positive | 3630264 - 3630659 | 15073.6 |
| allantoinase puue | C1O30_RS16445 | Not Available | Negative | 3630864 - 3631811 | 36326.8 |
| allantoin racemase | C1O30_RS16450 | Not Available | Negative | 3631871 - 3632608 | 25489.2 |
| gntr family transcriptional regulator | C1O30_RS16455 | Not Available | Negative | 3632605 - 3633348 | 27353.8 |
| ncs1 family nucleobase:cation symporter-1 | C1O30_RS16460 | Not Available | Positive | 3633503 - 3634987 | 53656.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
