Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase | C1O30_RS16360 | Not Available | Negative | 3615927 - 3616469 | 20205.6 |
| acireductone synthase | C1O30_RS16365 | Not Available | Negative | 3616466 - 3617176 | 25779.1 |
| methylthioribulose 1-phosphate dehydratase | C1O30_RS16370 | Not Available | Negative | 3617173 - 3617787 | 22437.8 |
| pyridoxal phosphate-dependent aminotransferase | C1O30_RS16375 | Not Available | Positive | 3617989 - 3619146 | 42533.6 |
| amidohydrolase | C1O30_RS16380 | Not Available | Positive | 3619134 - 3619901 | 28726.0 |
| allantoate amidohydrolase | C1O30_RS16390 | Not Available | Negative | 3620299 - 3621564 | 45399.2 |
| pyridoxal-phosphate-dependent aminotransferase family protein | C1O30_RS16395 | Not Available | Negative | 3621561 - 3622805 | 45557.1 |
| amino acid abc transporter atp-binding protein | C1O30_RS16400 | Not Available | Negative | 3622868 - 3623599 | 26572.4 |
| amino acid abc transporter permease | C1O30_RS16405 | Not Available | Negative | 3623580 - 3624236 | 24330.4 |
| amino acid abc transporter permease | C1O30_RS16410 | Not Available | Negative | 3624236 - 3624901 | 24317.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
