Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine phosphoribosyltransferase | C1O30_RS16310 | Not Available | Negative | 3604382 - 3604840 | 17014.6 |
| hypothetical protein | C1O30_RS16315 | Not Available | Positive | 3605072 - 3605266 | 7357.06 |
| beta-ala-his dipeptidase | C1O30_RS16320 | Not Available | Positive | 3605533 - 3606993 | 52539.2 |
| dna polymerase iv | C1O30_RS16325 | Not Available | Negative | 3607066 - 3608124 | 40093.8 |
| peptidoglycan meso-diaminopimelic acid protein amidase | C1O30_RS16330 | Not Available | Positive | 3608447 - 3609172 | 27545.0 |
| class ii glutamine amidotransferase | C1O30_RS16335 | Not Available | Negative | 3609143 - 3609910 | 29091.8 |
| d-sedoheptulose 7-phosphate isomerase | C1O30_RS16340 | Not Available | Negative | 3609977 - 3610558 | 20819.8 |
| acyl-coa dehydrogenase fade | C1O30_RS16345 | Not Available | Positive | 3610914 - 3613364 | 89530.9 |
| s-methyl-5-thioribose kinase | C1O30_RS16350 | Not Available | Negative | 3613426 - 3614628 | 44441.9 |
| s-methyl-5-thioribose-1-phosphate isomerase | C1O30_RS16355 | Not Available | Positive | 3614814 - 3615845 | 36608.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
