Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | C1O30_RS16155 | Not Available | Positive | 3568224 - 3569543 | 49293.6 |
| macro domain-containing protein | C1O30_RS16160 | Not Available | Negative | 3569618 - 3570667 | 39209.2 |
| duf4433 domain-containing protein | C1O30_RS16165 | Not Available | Negative | 3570681 - 3571328 | 25024.0 |
| duf4942 domain-containing protein | C1O30_RS16170 | Not Available | Negative | 3571433 - 3572266 | 31994.4 |
| ta system toxin cbta family protein | C1O30_RS16175 | Not Available | Negative | 3572384 - 3572704 | 11956.2 |
| type iv toxin-antitoxin system yeeu family antitoxin | C1O30_RS16180 | Not Available | Negative | 3572730 - 3573131 | 14771.7 |
| radc family protein | C1O30_RS16185 | Not Available | Negative | 3573131 - 3573604 | 18001.9 |
| duf932 domain-containing protein | C1O30_RS16190 | Not Available | Negative | 3573635 - 3574456 | 31140.2 |
| gtpase family protein | C1O30_RS16195 | Not Available | Negative | 3574553 - 3575419 | 32013.8 |
| hypothetical protein | C1O30_RS16200 | Not Available | Positive | 3576108 - 3576647 | 19715.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
