Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | C1O30_RS15750 | Not Available | Negative | 3483143 - 3483877 | 27540.9 |
| ribonuclease hi | C1O30_RS15755 | Not Available | Positive | 3483831 - 3484397 | 21340.9 |
| class i sam-dependent methyltransferase | C1O30_RS15760 | Not Available | Negative | 3484426 - 3485145 | 27364.4 |
| hydroxyacylglutathione hydrolase | C1O30_RS15765 | Not Available | Positive | 3485193 - 3485948 | 28344.5 |
| murein transglycosylase d | C1O30_RS15770 | Not Available | Positive | 3486019 - 3487416 | 51517.7 |
| endonuclease/exonuclease/phosphatase family protein | C1O30_RS15775 | Not Available | Negative | 3487470 - 3488261 | 29922.3 |
| Trna-asp | Not Available | Not Available | Positive | 3488461 - 3488537 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3488605 - 3488720 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3488847 - 3491752 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 3491945 - 3492020 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
