Dickeya zeae str. MS2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya zeae
StrainMS2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya zeae strain MS2 chromosome, complete genome.

Gene Summary

Adenine Count

1103787 bp

Thymine Count

1102832 bp

Guanine Count

1265585 bp

Cytosine Count

1267848 bp

Genome Length

4740052 bp

Protein-coding Genes

4086 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna/rna nuclease sfsaC1O30_RS15650Not AvailablePositive3466841 - 346756026403.5
rna polymerase-binding protein dksaC1O30_RS15655Not AvailablePositive3467729 - 346818417456.6
trna glutamyl-q(34) synthetase gluqrsC1O30_RS15660Not AvailablePositive3468277 - 346918533994.4
polynucleotide adenylyltransferase pcnbC1O30_RS15665Not AvailablePositive3469254 - 347065754239.4
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseC1O30_RS15670Not AvailablePositive3470654 - 347114218494.2
3-methyl-2-oxobutanoate hydroxymethyltransferaseC1O30_RS15675Not AvailablePositive3471312 - 347210628580.7
pantoate--beta-alanine ligaseC1O30_RS15680Not AvailablePositive3472122 - 347297631760.3
aspartate 1-decarboxylaseC1O30_RS15685Not AvailablePositive3473002 - 347338213957.7
abc transporter permeaseC1O30_RS15690Not AvailableNegative3473455 - 347422528479.9
abc transporter atp-binding proteinC1O30_RS15695Not AvailableNegative3474222 - 347514534189.5

Displaying genes 3121 – 3130 of 4237 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.