Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta' | C1O30_RS01180 | Not Available | Positive | 262296 - 266519 | 155394.0 |
| duf1176 domain-containing protein | C1O30_RS01185 | Not Available | Positive | 266996 - 268093 | 40269.6 |
| duf1127 domain-containing protein | C1O30_RS01190 | Not Available | Negative | 268362 - 268544 | 7623.18 |
| duf1127 domain-containing protein | C1O30_RS21805 | Not Available | Negative | 268782 - 268940 | 6324.75 |
| plp-dependent aminotransferase family protein | C1O30_RS01200 | Not Available | Positive | 269115 - 270551 | 53132.8 |
| molybdopterin-dependent oxidoreductase | C1O30_RS01205 | Not Available | Negative | 270563 - 271330 | 29249.1 |
| cytochrome b/b6 domain-containing protein | C1O30_RS01210 | Not Available | Negative | 271323 - 271925 | 22864.7 |
| hypothetical protein | C1O30_RS01215 | Not Available | Negative | 271938 - 272561 | 21523.8 |
| heavy metal response regulator transcription factor | C1O30_RS01220 | Not Available | Positive | 272718 - 273389 | 25408.0 |
| heavy metal sensor histidine kinase | C1O30_RS01225 | Not Available | Positive | 273386 - 274819 | 52602.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
