Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein reco | C1O30_RS15450 | Not Available | Negative | 3426258 - 3426992 | 27400.1 |
| gtpase era | C1O30_RS15455 | Not Available | Negative | 3427004 - 3427909 | 34195.5 |
| ribonuclease iii | C1O30_RS15460 | Not Available | Negative | 3427906 - 3428586 | 25564.7 |
| signal peptidase i | C1O30_RS15465 | Not Available | Negative | 3428770 - 3429738 | 35691.1 |
| translation elongation factor 4 | C1O30_RS15470 | Not Available | Negative | 3429754 - 3431553 | 66592.3 |
| soxr-reducing system protein rsec | C1O30_RS15475 | Not Available | Negative | 3431815 - 3432285 | 16886.8 |
| sigma-e factor regulatory protein rseb | C1O30_RS15480 | Not Available | Negative | 3432282 - 3433232 | 35075.6 |
| anti-sigma-e factor rsea | C1O30_RS15485 | Not Available | Negative | 3433232 - 3433897 | 24202.8 |
| rna polymerase sigma factor rpoe | C1O30_RS15490 | Not Available | Negative | 3433947 - 3434522 | 21778.8 |
| l-aspartate oxidase | C1O30_RS15495 | Not Available | Positive | 3434878 - 3436482 | 59734.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
