Dickeya zeae str. MS2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya zeae
StrainMS2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya zeae strain MS2 chromosome, complete genome.

Gene Summary

Adenine Count

1103787 bp

Thymine Count

1102832 bp

Guanine Count

1265585 bp

Cytosine Count

1267848 bp

Genome Length

4740052 bp

Protein-coding Genes

4086 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna adenosine(34) deaminase tadaC1O30_RS15400Not AvailableNegative3415666 - 341617818869.6
n-acetylmuramic acid 6-phosphate etheraseC1O30_RS15405Not AvailableNegative3416178 - 341711632952.9
tryptophan synthase subunit betaC1O30_RS15410Not AvailableNegative3417245 - 341758612970.7
type i secretion system permease/atpaseC1O30_RS15415Not AvailablePositive3418342 - 342052880621.2
hlyd family efflux transporter periplasmic adaptor subunitC1O30_RS15420Not AvailablePositive3420515 - 342133930514.3
bifunctional diguanylate cyclase/phosphodiesteraseC1O30_RS15425Not AvailableNegative3421350 - 342286756787.9
cyclic-guanylate-specific phosphodiesteraseC1O30_RS15430Not AvailableNegative3423646 - 342443729954.8
yfhl family 4fe-4s dicluster ferredoxinC1O30_RS15435Not AvailablePositive3424785 - 34250459812.72
holo-acp synthaseC1O30_RS15440Not AvailableNegative3425074 - 342545413720.7
pyridoxine 5'-phosphate synthaseC1O30_RS15445Not AvailableNegative3425454 - 342618526468.9

Displaying genes 3071 – 3080 of 4237 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.