Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1365 domain-containing protein | C1O30_RS15100 | Not Available | Positive | 3346820 - 3347563 | 29133.0 |
| sam-dependent methyltransferase | C1O30_RS15105 | Not Available | Positive | 3347560 - 3348786 | 46569.8 |
| hypothetical protein | C1O30_RS15110 | Not Available | Positive | 3348788 - 3349354 | 21378.2 |
| duf3833 domain-containing protein | C1O30_RS15115 | Not Available | Positive | 3349351 - 3349884 | 20517.2 |
| ybga family protein | C1O30_RS15120 | Not Available | Positive | 3349935 - 3350894 | 36695.8 |
| carbonic anhydrase | C1O30_RS15125 | Not Available | Positive | 3351063 - 3351698 | 23182.8 |
| autotransporter domain-containing protein | C1O30_RS15130 | Not Available | Positive | 3352192 - 3354066 | 66791.8 |
| acyltransferase family protein | C1O30_RS15135 | Not Available | Negative | 3354265 - 3355392 | 43455.2 |
| acyl-coa thioesterase | C1O30_RS15140 | Not Available | Positive | 3355991 - 3356377 | 14982.9 |
| antibiotic biosynthesis monooxygenase family protein | C1O30_RS15145 | Not Available | Negative | 3356652 - 3357029 | 13715.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
