Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | C1O30_RS15050 | Not Available | Positive | 3339153 - 3339458 | 11343.5 |
| tautomerase family protein | C1O30_RS15055 | Not Available | Positive | 3339462 - 3339848 | 14938.8 |
| duf4865 family protein | C1O30_RS15060 | Not Available | Positive | 3339857 - 3340375 | 19183.9 |
| voc family protein | C1O30_RS15065 | Not Available | Negative | 3340429 - 3340821 | 14371.7 |
| duf3750 domain-containing protein | C1O30_RS15070 | Not Available | Negative | 3341066 - 3341845 | 28285.1 |
| mfs transporter | C1O30_RS15075 | Not Available | Positive | 3341984 - 3343186 | 41546.4 |
| merr family transcriptional regulator | C1O30_RS15080 | Not Available | Positive | 3343391 - 3344137 | 28278.5 |
| nuclear transport factor 2 family protein | C1O30_RS15085 | Not Available | Positive | 3344400 - 3344852 | 17448.7 |
| sdr family nad(p)-dependent oxidoreductase | C1O30_RS15090 | Not Available | Positive | 3344849 - 3345568 | 25668.2 |
| nad(p)/fad-dependent oxidoreductase | C1O30_RS15095 | Not Available | Positive | 3345565 - 3346827 | 47648.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
