Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase 1 | C1O30_RS14790 | Not Available | Positive | 3282538 - 3284607 | 80350.9 |
| exopolyphosphatase | C1O30_RS14795 | Not Available | Positive | 3284612 - 3286141 | 57866.1 |
| yfgg family protein | C1O30_RS14800 | Not Available | Positive | 3286348 - 3286575 | 8603.63 |
| dksa/trar family c4-type zinc finger protein | C1O30_RS14805 | Not Available | Positive | 3286758 - 3287024 | 9689.14 |
| universal stress protein | C1O30_RS14810 | Not Available | Negative | 3287116 - 3287544 | 15587.8 |
| duf4186 domain-containing protein | C1O30_RS14815 | Not Available | Positive | 3287770 - 3288135 | 14049.8 |
| isochorismatase family protein | C1O30_RS14820 | Not Available | Negative | 3288132 - 3288656 | 19357.9 |
| Trna-ser | Not Available | Not Available | Positive | 3288835 - 3288922 | Not Available |
| ftsh protease modulator ycca | C1O30_RS14830 | Not Available | Positive | 3289158 - 3289817 | 23545.5 |
| winged helix-turn-helix transcriptional regulator | C1O30_RS14835 | Not Available | Negative | 3289930 - 3290289 | 13795.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
