Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-containing alcohol dehydrogenase family protein | C1O30_RS14585 | Not Available | Negative | 3234087 - 3235178 | 38374.2 |
| d-mannonate dehydratase mand | C1O30_RS14590 | Not Available | Positive | 3235453 - 3236667 | 45696.6 |
| glucuronate isomerase | C1O30_RS14595 | Not Available | Positive | 3236694 - 3238100 | 54167.0 |
| mfs transporter | C1O30_RS14600 | Not Available | Positive | 3238131 - 3239675 | 57698.4 |
| mannitol dehydrogenase family protein | C1O30_RS14605 | Not Available | Positive | 3239738 - 3241195 | 53613.3 |
| gntr family transcriptional regulator | C1O30_RS14610 | Not Available | Positive | 3241331 - 3242017 | 26215.6 |
| urocanate hydratase | C1O30_RS14615 | Not Available | Negative | 3242145 - 3243836 | 61043.8 |
| histidine ammonia-lyase | C1O30_RS14620 | Not Available | Negative | 3243850 - 3245412 | 54507.9 |
| abc transporter atp-binding protein | C1O30_RS14625 | Not Available | Negative | 3245524 - 3246309 | 29400.3 |
| abc transporter permease | C1O30_RS14630 | Not Available | Negative | 3246306 - 3247166 | 31004.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
