Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | C1O30_RS01075 | Not Available | Positive | 242629 - 243168 | 20621.0 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 243542 - 245084 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 245171 - 245246 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 245439 - 248344 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 248471 - 248586 | Not Available |
| udp-n-acetylmuramate dehydrogenase | C1O30_RS01100 | Not Available | Positive | 248776 - 249813 | 37740.1 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | C1O30_RS01105 | Not Available | Positive | 249810 - 250769 | 35087.0 |
| type i pantothenate kinase | C1O30_RS01110 | Not Available | Negative | 250799 - 251749 | 36199.6 |
| Trna-thr | Not Available | Not Available | Positive | 252375 - 252450 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 252468 - 252552 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
