Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine transaminase | C1O30_RS14435 | Not Available | Negative | 3203437 - 3204678 | 45835.2 |
| d-amino-acid transaminase | C1O30_RS14440 | Not Available | Positive | 3205163 - 3206023 | 32013.3 |
| duf3772 domain-containing protein | C1O30_RS14445 | Not Available | Negative | 3206146 - 3208596 | 88735.4 |
| Trna-arg | Not Available | Not Available | Positive | 3208925 - 3209001 | Not Available |
| voc family protein | C1O30_RS14455 | Not Available | Negative | 3209297 - 3210139 | 31522.4 |
| abc transporter atp-binding protein | C1O30_RS14460 | Not Available | Negative | 3210173 - 3210892 | 26025.9 |
| abc transporter atp-binding protein | C1O30_RS14465 | Not Available | Negative | 3210889 - 3211668 | 27716.1 |
| branched-chain amino acid abc transporter permease | C1O30_RS14470 | Not Available | Negative | 3211665 - 3212552 | 31551.9 |
| branched-chain amino acid abc transporter permease | C1O30_RS14475 | Not Available | Negative | 3212545 - 3213438 | 31513.7 |
| abc transporter substrate-binding protein | C1O30_RS14480 | Not Available | Negative | 3213487 - 3214614 | 39834.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
