Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | C1O30_RS14325 | Not Available | Positive | 3183626 - 3184384 | 26525.7 |
| hotdog fold thioesterase | C1O30_RS14330 | Not Available | Positive | 3184427 - 3184843 | 15217.6 |
| is4 family transposase | C1O30_RS14335 | Not Available | Positive | 3184959 - 3186281 | 50539.4 |
| alkene reductase | C1O30_RS14345 | Not Available | Negative | 3186669 - 3187727 | 38587.7 |
| rbbp9/yden family alpha/beta hydrolase | C1O30_RS14350 | Not Available | Negative | 3188142 - 3188714 | 21767.9 |
| membrane protein ypdk | C1O30_RS21905 | Not Available | Positive | 3189224 - 3189298 | 2899.83 |
| prepilin peptidase | C1O30_RS14365 | Not Available | Negative | 3189473 - 3190324 | 31284.3 |
| type ii secretion system protein gspm | C1O30_RS14370 | Not Available | Negative | 3190452 - 3190940 | 18757.0 |
| type ii secretion system protein gspl | C1O30_RS14375 | Not Available | Negative | 3190937 - 3192139 | 45362.4 |
| type ii secretion system minor pseudopilin gspk | C1O30_RS14380 | Not Available | Negative | 3192136 - 3193236 | 40032.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
