Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltransferase | C1O30_RS13665 | Not Available | Positive | 3018184 - 3019947 | 62759.0 |
| methyl-accepting chemotaxis protein | C1O30_RS13670 | Not Available | Negative | 3019941 - 3021551 | 58432.4 |
| s66 peptidase family protein | C1O30_RS13675 | Not Available | Positive | 3021931 - 3022947 | 37231.4 |
| lysr family transcriptional regulator | C1O30_RS13680 | Not Available | Negative | 3022938 - 3023822 | 33382.2 |
| pyridoxal phosphate-dependent aminotransferase | C1O30_RS13685 | Not Available | Positive | 3024183 - 3025352 | 42405.5 |
| transporter substrate-binding domain-containing protein | C1O30_RS13690 | Not Available | Positive | 3025475 - 3026251 | 27690.3 |
| hypothetical protein | C1O30_RS13695 | Not Available | Negative | 3026362 - 3027480 | 41021.4 |
| hypothetical protein | C1O30_RS13700 | Not Available | Positive | 3027669 - 3028019 | 13522.2 |
| duf3885 domain-containing protein | C1O30_RS13705 | Not Available | Positive | 3028139 - 3028636 | 19276.9 |
| nadph-dependent fmn reductase | C1O30_RS13710 | Not Available | Positive | 3028806 - 3029351 | 19632.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
