Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| emmdr/yeeo family multidrug/toxin efflux mate transporter | C1O30_RS13570 | Not Available | Positive | 3001495 - 3002931 | 51858.1 |
| cytochrome b562 | C1O30_RS13575 | Not Available | Positive | 3003154 - 3003531 | 13119.9 |
| cellulase family glycosylhydrolase | C1O30_RS13580 | Not Available | Positive | 3004024 - 3005310 | 47022.1 |
| right-handed parallel beta-helix repeat-containing protein | C1O30_RS13585 | Not Available | Negative | 3005384 - 3006661 | 45513.1 |
| phage holin family protein | C1O30_RS13590 | Not Available | Positive | 3007282 - 3007593 | 10856.5 |
| glycoside hydrolase family 104 protein | C1O30_RS13595 | Not Available | Positive | 3007583 - 3008074 | 18132.3 |
| rz-like lysis system protein lysb | C1O30_RS13600 | Not Available | Positive | 3008071 - 3008511 | 16504.7 |
| rz1-like lysis system protein lysc | C1O30_RS21715 | Not Available | Positive | 3008396 - 3008665 | 9063.67 |
| Trna-leu | Not Available | Not Available | Positive | 3008840 - 3008926 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 3008935 - 3009008 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
