Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| macrodomain ter protein matp | C1O30_RS13215 | Not Available | Negative | 2930192 - 2930665 | 18654.6 |
| aaa family atpase | C1O30_RS13220 | Not Available | Positive | 2930874 - 2932604 | 64810.6 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | C1O30_RS13225 | Not Available | Positive | 2932695 - 2933213 | 18909.1 |
| rpib/laca/lacb family sugar-phosphate isomerase | C1O30_RS13230 | Not Available | Positive | 2933543 - 2934181 | 22585.0 |
| Trna-ser | Not Available | Not Available | Positive | 2934365 - 2934454 | Not Available |
| methyl-accepting chemotaxis protein | C1O30_RS13240 | Not Available | Positive | 2935180 - 2936784 | 57314.5 |
| phosphate starvation-inducible protein phoh | C1O30_RS13245 | Not Available | Negative | 2936852 - 2937640 | 29410.4 |
| flagella biosynthesis regulatory protein fliz | C1O30_RS13255 | Not Available | Negative | 2938285 - 2938797 | 20586.6 |
| rna polymerase sigma factor flia | C1O30_RS13260 | Not Available | Negative | 2938850 - 2939572 | 27418.6 |
| hypothetical protein | C1O30_RS13265 | Not Available | Negative | 2939954 - 2941363 | 53205.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
