Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:flavin oxidoreductase/nadh oxidase | C1O30_RS13165 | Not Available | Positive | 2915689 - 2916783 | 39745.7 |
| kdo(2)-lipid iv(a) acyltransferase | C1O30_RS13170 | Not Available | Positive | 2917028 - 2917948 | 35510.7 |
| multidrug efflux mfs transporter mdtg | C1O30_RS13175 | Not Available | Positive | 2917995 - 2919221 | 44177.1 |
| glucans biosynthesis glucosyltransferase mdoh | C1O30_RS13180 | Not Available | Negative | 2919306 - 2921855 | 96393.9 |
| glucan biosynthesis protein g | C1O30_RS13185 | Not Available | Negative | 2921848 - 2923350 | 56579.7 |
| duf2946 family protein | C1O30_RS21900 | Not Available | Positive | 2923821 - 2924255 | 15820.5 |
| pepsy-associated tm helix domain-containing protein | C1O30_RS13195 | Not Available | Positive | 2924429 - 2925910 | 54531.5 |
| methyl-accepting chemotaxis protein | C1O30_RS13200 | Not Available | Negative | 2926048 - 2927712 | 59574.8 |
| hypothetical protein | C1O30_RS13205 | Not Available | Negative | 2928917 - 2929192 | 10115.0 |
| ghot/ortt family toxin | C1O30_RS13210 | Not Available | Positive | 2929791 - 2929976 | 7188.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
