Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | C1O30_RS12860 | Not Available | Positive | 2849652 - 2850761 | 40169.9 |
| porin | C1O30_RS12865 | Not Available | Positive | 2851321 - 2852430 | 39850.6 |
| porin | C1O30_RS12870 | Not Available | Positive | 2852905 - 2853984 | 38842.1 |
| amino acid aminotransferase | C1O30_RS12875 | Not Available | Positive | 2854176 - 2855366 | 43372.5 |
| mbl fold metallo-hydrolase | C1O30_RS12880 | Not Available | Negative | 2855462 - 2856100 | 22927.3 |
| ycbk family protein | C1O30_RS12885 | Not Available | Negative | 2856213 - 2856761 | 20642.9 |
| l,d-transpeptidase | C1O30_RS12890 | Not Available | Negative | 2856961 - 2858664 | 62952.6 |
| protein adenylyltransferase selo | C1O30_RS12895 | Not Available | Negative | 2858984 - 2860435 | 55430.5 |
| eal domain-containing protein | C1O30_RS12900 | Not Available | Negative | 2860673 - 2861407 | 27543.8 |
| lipoate--protein ligase a | C1O30_RS12905 | Not Available | Negative | 2861735 - 2862751 | 37869.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
