Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c40 family peptidase | C1O30_RS12660 | Not Available | Positive | 2798787 - 2799794 | 36546.4 |
| ynhf family membrane protein | C1O30_RS12665 | Not Available | Negative | 2799898 - 2799987 | 3144.04 |
| hth-type transcriptional repressor purr | C1O30_RS12670 | Not Available | Positive | 2800371 - 2801396 | 37828.3 |
| cyclopropane fatty acyl phospholipid synthase | C1O30_RS12675 | Not Available | Positive | 2801820 - 2802971 | 44714.6 |
| riboflavin synthase subunit alpha | C1O30_RS12680 | Not Available | Negative | 2803120 - 2803779 | 23995.9 |
| mate family efflux transporter | C1O30_RS12685 | Not Available | Positive | 2804059 - 2805432 | 49510.2 |
| Trna-val | Not Available | Not Available | Positive | 2805589 - 2805665 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2805702 - 2805778 | Not Available |
| alpha/beta hydrolase-fold protein | C1O30_RS12700 | Not Available | Negative | 2806034 - 2807218 | 43448.9 |
| glycoside hydrolase family 1 protein | C1O30_RS12705 | Not Available | Negative | 2807596 - 2808993 | 52993.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
