Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf333 domain-containing protein | C1O30_RS12345 | Not Available | Negative | 2730586 - 2730876 | 9803.85 |
| methyl-accepting chemotaxis protein | C1O30_RS12350 | Not Available | Positive | 2731177 - 2733216 | 74004.0 |
| hypothetical protein | C1O30_RS12355 | Not Available | Negative | 2733507 - 2734004 | 18638.5 |
| hypothetical protein | C1O30_RS21605 | Not Available | Negative | 2734554 - 2734844 | 8419.99 |
| pesticin c-terminus-like muramidase | C1O30_RS21465 | Not Available | Positive | 2734906 - 2736426 | 55082.4 |
| trna 2-thiocytidine(32) synthetase ttca | C1O30_RS12370 | Not Available | Positive | 2736769 - 2737710 | 35661.9 |
| zinc transporter zntb | C1O30_RS12380 | Not Available | Negative | 2738136 - 2739113 | 36327.0 |
| peptide abc transporter substrate-binding protein | C1O30_RS12385 | Not Available | Negative | 2739256 - 2740836 | 59025.1 |
| murein tripeptide amidase mpaa | C1O30_RS12390 | Not Available | Positive | 2741138 - 2741869 | 26197.8 |
| thiol peroxidase | C1O30_RS12395 | Not Available | Positive | 2741926 - 2742429 | 17505.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
