Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate permease | C1O30_RS12295 | Not Available | Positive | 2714921 - 2716471 | 54283.8 |
| (fe-s)-binding protein | C1O30_RS12300 | Not Available | Positive | 2716574 - 2717293 | 26035.9 |
| lutb/lldf family l-lactate oxidation iron-sulfur protein | C1O30_RS12305 | Not Available | Positive | 2717305 - 2718726 | 52360.1 |
| lutc/ykgg family protein | C1O30_RS12310 | Not Available | Positive | 2718726 - 2719421 | 25087.1 |
| atp-dependent rna helicase hrpa | C1O30_RS12315 | Not Available | Negative | 2719508 - 2723395 | 148198.0 |
| fmn-dependent nadh-azoreductase | C1O30_RS12320 | Not Available | Positive | 2723789 - 2724394 | 21645.0 |
| ynbe family lipoprotein | C1O30_RS12325 | Not Available | Negative | 2724570 - 2724803 | 8360.11 |
| ydbh family protein | C1O30_RS12330 | Not Available | Negative | 2724842 - 2727445 | 97078.7 |
| methyl-accepting chemotaxis protein | C1O30_RS12335 | Not Available | Positive | 2727751 - 2729304 | 56562.5 |
| 2-hydroxyacid dehydrogenase | C1O30_RS12340 | Not Available | Positive | 2729526 - 2730518 | 36738.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
