Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | C1O30_RS12040 | Not Available | Negative | 2662736 - 2664748 | 72072.7 |
| methyl-accepting chemotaxis protein | C1O30_RS12200 | Not Available | Positive | 2691581 - 2693272 | 61144.4 |
| alginate lyase family protein | C1O30_RS12205 | Not Available | Negative | 2693424 - 2694560 | 41937.2 |
| is3 family transposase | C1O30_RS12210 | Not Available | Positive | 2695382 - 2696930 | 57198.4 |
| hypothetical protein | C1O30_RS12215 | Not Available | Negative | 2697052 - 2697351 | 10816.8 |
| metallophosphoesterase | C1O30_RS12220 | Not Available | Negative | 2697770 - 2698468 | 25731.8 |
| chloride channel protein | C1O30_RS12225 | Not Available | Positive | 2698603 - 2699889 | 45457.4 |
| abc transporter substrate-binding protein | C1O30_RS12230 | Not Available | Negative | 2699922 - 2701502 | 58405.6 |
| abc transporter atp-binding protein | C1O30_RS12235 | Not Available | Negative | 2701581 - 2702264 | 25471.1 |
| atp-binding cassette domain-containing protein | C1O30_RS12240 | Not Available | Negative | 2702264 - 2703106 | 31804.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
