Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | C1O30_RS11990 | Not Available | Negative | 2649845 - 2650693 | 31418.5 |
| metallophosphoesterase | C1O30_RS11995 | Not Available | Negative | 2650719 - 2651852 | 42247.8 |
| lysr family transcriptional regulator | C1O30_RS12000 | Not Available | Positive | 2651968 - 2652882 | 33588.5 |
| carboxy terminal-processing peptidase | C1O30_RS12005 | Not Available | Negative | 2653076 - 2655097 | 75614.3 |
| rna chaperone proq | C1O30_RS12010 | Not Available | Negative | 2655117 - 2655848 | 26910.9 |
| gaf domain-containing protein | C1O30_RS12015 | Not Available | Negative | 2655933 - 2656439 | 18282.9 |
| membrane integrity lipid transport subunit yebs | C1O30_RS12020 | Not Available | Positive | 2656742 - 2658022 | 48067.1 |
| pqib family protein | C1O30_RS12025 | Not Available | Positive | 2658038 - 2660662 | 94419.5 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | C1O30_RS12030 | Not Available | Positive | 2660768 - 2662216 | 53737.6 |
| yebw family protein | C1O30_RS12035 | Not Available | Positive | 2662326 - 2662517 | 7211.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
