Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | C1O30_RS11840 | Not Available | Positive | 2613321 - 2614415 | 41061.7 |
| tautomerase ppta | C1O30_RS11845 | Not Available | Positive | 2614710 - 2614940 | 8694.37 |
| hypothetical protein | C1O30_RS11850 | Not Available | Positive | 2615156 - 2615647 | 18564.3 |
| duf1852 domain-containing protein | C1O30_RS11855 | Not Available | Positive | 2616452 - 2617429 | 37692.0 |
| methionine synthase | C1O30_RS11860 | Not Available | Positive | 2617457 - 2618488 | 38594.4 |
| glutathione s-transferase family protein | C1O30_RS11865 | Not Available | Negative | 2618635 - 2619258 | 23477.9 |
| glycoside hydrolase family 105 protein | C1O30_RS11870 | Not Available | Positive | 2619629 - 2620705 | 40714.3 |
| hypothetical protein | C1O30_RS11875 | Not Available | Positive | 2620742 - 2623225 | 93439.1 |
| mfs transporter | C1O30_RS11880 | Not Available | Positive | 2623262 - 2624608 | 48277.8 |
| laci family dna-binding transcriptional regulator | C1O30_RS11885 | Not Available | Negative | 2624633 - 2625673 | 38333.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
