Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor/glpr family dna-binding transcription regulator | C1O30_RS11790 | Not Available | Positive | 2601694 - 2602473 | 28105.9 |
| pyridoxamine 5'-phosphate oxidase family protein | C1O30_RS11795 | Not Available | Negative | 2602519 - 2603376 | 31881.1 |
| glutathione s-transferase | C1O30_RS11800 | Not Available | Negative | 2603376 - 2603978 | 21912.5 |
| lysr family transcriptional regulator | C1O30_RS11805 | Not Available | Positive | 2604078 - 2604977 | 33263.5 |
| abc transporter permease | C1O30_RS11810 | Not Available | Negative | 2605060 - 2605878 | 29432.1 |
| abc transporter permease | C1O30_RS11815 | Not Available | Negative | 2605912 - 2607183 | 47140.4 |
| abc transporter substrate-binding protein | C1O30_RS11820 | Not Available | Negative | 2607218 - 2608249 | 37807.8 |
| nad-dependent succinate-semialdehyde dehydrogenase | C1O30_RS11825 | Not Available | Negative | 2608573 - 2610033 | 51938.4 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C1O30_RS11830 | Not Available | Negative | 2610055 - 2611320 | 44736.8 |
| plp-dependent aminotransferase family protein | C1O30_RS11835 | Not Available | Positive | 2611446 - 2612933 | 55470.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
