Dickeya zeae str. MS2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya zeae
StrainMS2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya zeae strain MS2 chromosome, complete genome.

Gene Summary

Adenine Count

1103787 bp

Thymine Count

1102832 bp

Guanine Count

1265585 bp

Cytosine Count

1267848 bp

Genome Length

4740052 bp

Protein-coding Genes

4086 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pantetheine-phosphate adenylyltransferaseC1O30_RS00825Not AvailableNegative185507 - 18598617701.5
glycosyltransferase family 2 proteinC1O30_RS00830Not AvailableNegative185976 - 18676730278.8
lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferaseC1O30_RS00835Not AvailableNegative186767 - 18804448005.7
glycosyltransferase family 4 proteinC1O30_RS00840Not AvailablePositive188590 - 18971441851.8
glycosyltransferase family 9 proteinC1O30_RS00845Not AvailablePositive189711 - 19082041282.9
o-antigen ligase family proteinC1O30_RS00850Not AvailablePositive190817 - 19202845305.5
glycosyltransferase family 4 proteinC1O30_RS00855Not AvailableNegative192074 - 19319241808.1
putative lipopolysaccharide heptosyltransferase iiiC1O30_RS00860Not AvailableNegative193189 - 19427440666.6
lipopolysaccharide heptosyltransferase rfacC1O30_RS00865Not AvailableNegative194287 - 19525836538.8
adp-heptose--lps heptosyltransferase rfafC1O30_RS00870Not AvailableNegative195255 - 19630738802.9

Displaying genes 231 – 240 of 4237 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.