Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma 54-interacting transcriptional regulator | C1O30_RS11640 | Not Available | Negative | 2567338 - 2568315 | 36194.3 |
| response regulator | C1O30_RS11645 | Not Available | Negative | 2568693 - 2569334 | 23706.3 |
| pas domain s-box protein | C1O30_RS11650 | Not Available | Negative | 2569367 - 2570833 | 56713.3 |
| rna polymerase sigma factor | C1O30_RS11655 | Not Available | Negative | 2571083 - 2571637 | 21162.3 |
| type iii secretion system gatekeeper subunit sctw | C1O30_RS11660 | Not Available | Positive | 2571960 - 2573114 | 42130.0 |
| type iii secretion system export apparatus subunit sctv | C1O30_RS11665 | Not Available | Positive | 2573118 - 2575220 | 77655.4 |
| type iii secretion system inner membrane ring subunit sctd | C1O30_RS11670 | Not Available | Positive | 2575231 - 2576202 | 35618.4 |
| type iii secretion system atpase sctn | C1O30_RS11675 | Not Available | Positive | 2576202 - 2577584 | 49942.9 |
| type iii secretion protein | C1O30_RS11680 | Not Available | Positive | 2577571 - 2578050 | 18704.4 |
| type iii secretion system hrpp c-terminal domain-containing protein | C1O30_RS11685 | Not Available | Positive | 2578047 - 2578598 | 19921.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
