Dickeya zeae str. MS2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya zeae
StrainMS2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya zeae strain MS2 chromosome, complete genome.

Gene Summary

Adenine Count

1103787 bp

Thymine Count

1102832 bp

Guanine Count

1265585 bp

Cytosine Count

1267848 bp

Genome Length

4740052 bp

Protein-coding Genes

4086 genes

Non-Coding Genes

151 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is3 family transposaseC1O30_RS21890Not AvailableNegative2538022 - 253829710106.8
hypothetical proteinC1O30_RS11545Not AvailableNegative2538521 - 253878410326.2
hemagglutinin repeat-containing proteinC1O30_RS11550Not AvailableNegative2538781 - 2548062314897.0
shlb/fhac/hecb family hemolysin secretion/activation proteinC1O30_RS11555Not AvailableNegative2548169 - 254984562367.2
harpin hrpnC1O30_RS11560Not AvailableNegative2550208 - 255120633552.6
hrpv family type iii secretion system proteinC1O30_RS11565Not AvailableNegative2551366 - 255177615098.3
hrpt family type iii secretion system proteinC1O30_RS11570Not AvailableNegative2551773 - 25519616994.63
type iii secretion system outer membrane ring subunit sctcC1O30_RS11575Not AvailableNegative2551995 - 255406775122.8
type iii secretion system chaperoneC1O30_RS11580Not AvailableNegative2554060 - 255449415836.2
type iii secretion protein hrpfC1O30_RS11585Not AvailableNegative2554481 - 25547088109.36

Displaying genes 2341 – 2350 of 4237 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.