Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | C1O30_RS11350 | Not Available | Positive | 2497410 - 2498702 | 48681.2 |
| oligogalacturonate-specific porin kdgm | C1O30_RS11355 | Not Available | Positive | 2498952 - 2499662 | 26583.9 |
| pectin acetylesterase paex | C1O30_RS11360 | Not Available | Positive | 2499933 - 2500901 | 35165.9 |
| metal-dependent hydrolase | C1O30_RS11365 | Not Available | Positive | 2500979 - 2501557 | 21797.1 |
| l-cystine transporter | C1O30_RS11370 | Not Available | Positive | 2501703 - 2503094 | 48834.0 |
| osmotically-inducible lipoprotein osme | C1O30_RS11375 | Not Available | Negative | 2503165 - 2503494 | 12216.6 |
| ammonia-dependent nad(+) synthetase | C1O30_RS11380 | Not Available | Positive | 2503723 - 2504547 | 30408.3 |
| aromatic amino acid dmt transporter yddg | C1O30_RS11385 | Not Available | Positive | 2504684 - 2505592 | 33077.2 |
| nitrous oxide-stimulated promoter family protein | C1O30_RS11390 | Not Available | Positive | 2505667 - 2506014 | 13534.6 |
| integration host factor subunit alpha | C1O30_RS11395 | Not Available | Negative | 2506138 - 2506437 | 11326.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
