Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2627 domain-containing protein | C1O30_RS11300 | Not Available | Negative | 2486992 - 2487108 | 4108.59 |
| fructosamine kinase family protein | C1O30_RS11305 | Not Available | Positive | 2488339 - 2489196 | 32924.9 |
| ynib family protein | C1O30_RS11310 | Not Available | Negative | 2489283 - 2489831 | 20556.7 |
| cupin domain-containing protein | C1O30_RS11315 | Not Available | Negative | 2490100 - 2490432 | 12391.9 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | C1O30_RS11320 | Not Available | Positive | 2490755 - 2491591 | 31342.2 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | C1O30_RS11325 | Not Available | Positive | 2491772 - 2492533 | 27201.7 |
| pectate disaccharide-lyase pelw | C1O30_RS11330 | Not Available | Positive | 2492794 - 2494425 | 63075.4 |
| carbohydrate abc transporter permease | C1O30_RS11335 | Not Available | Positive | 2494469 - 2495359 | 33357.1 |
| carbohydrate abc transporter permease | C1O30_RS11340 | Not Available | Positive | 2495352 - 2496254 | 34188.4 |
| abc transporter atp-binding protein | C1O30_RS11345 | Not Available | Positive | 2496268 - 2497395 | 42147.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
