Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease ph | C1O30_RS00775 | Not Available | Positive | 178437 - 179153 | 25373.4 |
| orotate phosphoribosyltransferase | C1O30_RS00780 | Not Available | Positive | 179253 - 179894 | 23333.0 |
| nucleoid occlusion factor slma | C1O30_RS00785 | Not Available | Negative | 179943 - 180539 | 22935.7 |
| dutp diphosphatase | C1O30_RS00790 | Not Available | Negative | 180647 - 181105 | 16118.5 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | C1O30_RS00795 | Not Available | Negative | 181074 - 182330 | 44199.1 |
| ferritin-like domain-containing protein | C1O30_RS00800 | Not Available | Negative | 182484 - 182969 | 17695.3 |
| radc family protein | C1O30_RS00805 | Not Available | Positive | 183180 - 183845 | 24769.0 |
| 50s ribosomal protein l28 | C1O30_RS00810 | Not Available | Positive | 184085 - 184321 | 8965.01 |
| 50s ribosomal protein l33 | C1O30_RS00815 | Not Available | Positive | 184333 - 184500 | 6373.91 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | C1O30_RS00820 | Not Available | Positive | 184640 - 185449 | 30296.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
