Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase | C1O30_RS11110 | Not Available | Positive | 2448723 - 2450261 | 49144.5 |
| dna-binding protein | C1O30_RS11115 | Not Available | Positive | 2450275 - 2450607 | 12681.9 |
| sdr family oxidoreductase | C1O30_RS11120 | Not Available | Positive | 2450792 - 2451466 | 23905.6 |
| type iii effector hrpk domain-containing protein | C1O30_RS11125 | Not Available | Negative | 2451554 - 2453230 | 58617.5 |
| hypothetical protein | C1O30_RS11130 | Not Available | Positive | 2453338 - 2453586 | 9334.64 |
| hypothetical protein | C1O30_RS11135 | Not Available | Positive | 2453978 - 2454577 | 19889.3 |
| abc transporter substrate-binding protein | C1O30_RS11140 | Not Available | Positive | 2454990 - 2456111 | 41849.4 |
| d-amino acid dehydrogenase | C1O30_RS11145 | Not Available | Negative | 2456204 - 2457454 | 45414.5 |
| spovr family protein | C1O30_RS11150 | Not Available | Positive | 2457787 - 2459322 | 60691.9 |
| fatty acid metabolism transcriptional regulator fadr | C1O30_RS11155 | Not Available | Negative | 2459401 - 2460120 | 26972.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
