Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | C1O30_RS11060 | Not Available | Positive | 2429727 - 2430278 | 20367.8 |
| sigma-70 family rna polymerase sigma factor | C1O30_RS11065 | Not Available | Positive | 2430301 - 2430816 | 19411.2 |
| anti-sigma factor family protein | C1O30_RS11070 | Not Available | Positive | 2430813 - 2431616 | 29677.4 |
| ycei family protein | C1O30_RS11075 | Not Available | Negative | 2431677 - 2432246 | 20799.1 |
| exodeoxyribonuclease v subunit alpha | C1O30_RS11080 | Not Available | Negative | 2432504 - 2434549 | 73979.9 |
| exodeoxyribonuclease v subunit beta | C1O30_RS11085 | Not Available | Negative | 2434546 - 2438238 | 138835.0 |
| exodeoxyribonuclease v subunit gamma | C1O30_RS11090 | Not Available | Negative | 2438235 - 2441741 | 132852.0 |
| type iii secretion system chaperone | C1O30_RS11095 | Not Available | Negative | 2441942 - 2442364 | 15603.8 |
| avre-family type 3 secretion system effector | C1O30_RS11100 | Not Available | Negative | 2442430 - 2447334 | 174148.0 |
| type iii effector protein | C1O30_RS11105 | Not Available | Positive | 2447572 - 2448588 | 30915.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
