Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress-induced protein ychh | C1O30_RS11010 | Not Available | Negative | 2419613 - 2419882 | 10220.6 |
| aminoacyl-trna hydrolase | C1O30_RS11015 | Not Available | Positive | 2420155 - 2420742 | 21189.7 |
| redox-regulated atpase ychf | C1O30_RS11020 | Not Available | Positive | 2420872 - 2421963 | 39575.4 |
| hypothetical protein | C1O30_RS11025 | Not Available | Negative | 2422100 - 2422870 | 27331.2 |
| is3 family transposase | C1O30_RS11030 | Not Available | Negative | 2423343 - 2423729 | 15143.5 |
| is3 family transposase | C1O30_RS11035 | Not Available | Negative | 2423807 - 2424906 | 43163.0 |
| azlc family abc transporter permease | C1O30_RS11040 | Not Available | Negative | 2424983 - 2425438 | 16203.7 |
| helix-turn-helix transcriptional regulator | C1O30_RS11045 | Not Available | Positive | 2425562 - 2426398 | 30942.9 |
| glycoside hydrolase family 30 protein | C1O30_RS11050 | Not Available | Negative | 2426531 - 2427772 | 45305.3 |
| atp-dependent rna helicase dbpa | C1O30_RS11055 | Not Available | Negative | 2428139 - 2429512 | 49915.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
