Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1471 family protein ydgh | C1O30_RS10960 | Not Available | Positive | 2408878 - 2409828 | 33996.5 |
| is4 family transposase | C1O30_RS10965 | Not Available | Positive | 2409948 - 2411270 | 50539.4 |
| 3-deoxy-8-phosphooctulonate synthase | C1O30_RS10970 | Not Available | Negative | 2411314 - 2412168 | 31034.6 |
| invasion regulator sirb1 | C1O30_RS10975 | Not Available | Negative | 2412225 - 2413034 | 30604.7 |
| peptide chain release factor n(5)-glutamine methyltransferase | C1O30_RS10980 | Not Available | Negative | 2413258 - 2414109 | 31097.7 |
| peptide chain release factor 1 | C1O30_RS10985 | Not Available | Negative | 2414106 - 2415191 | 40540.8 |
| glutamyl-trna reductase | C1O30_RS10990 | Not Available | Negative | 2415238 - 2416494 | 46536.9 |
| lipoprotein insertase outer membrane protein lolb | C1O30_RS10995 | Not Available | Positive | 2416705 - 2417325 | 23728.4 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | C1O30_RS11000 | Not Available | Positive | 2417329 - 2418201 | 31565.9 |
| ribose-phosphate diphosphokinase | C1O30_RS11005 | Not Available | Positive | 2418331 - 2419278 | 34300.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
