Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family type i secretion periplasmic adaptor subunit | C1O30_RS10805 | Not Available | Negative | 2368102 - 2369448 | 49693.9 |
| type i secretion system permease/atpase | C1O30_RS10810 | Not Available | Negative | 2369462 - 2371195 | 62353.6 |
| protease inhibitor inh/omp19 family protein | C1O30_RS10815 | Not Available | Negative | 2371212 - 2371574 | 12866.5 |
| serralysin family metalloprotease | C1O30_RS10820 | Not Available | Negative | 2371777 - 2373210 | 51824.0 |
| sdr family oxidoreductase | C1O30_RS10830 | Not Available | Negative | 2373724 - 2374581 | 29140.8 |
| srfa family protein | C1O30_RS10835 | Not Available | Positive | 2374991 - 2376310 | 47806.4 |
| virulence factor srfb | C1O30_RS10840 | Not Available | Positive | 2376313 - 2379303 | 112690.0 |
| putative virulence factor | C1O30_RS10845 | Not Available | Positive | 2379300 - 2381813 | 94655.8 |
| hypothetical protein | C1O30_RS10850 | Not Available | Positive | 2382381 - 2382839 | 17310.2 |
| gmc family oxidoreductase | C1O30_RS10855 | Not Available | Positive | 2382836 - 2384674 | 68032.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
