Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | C1O30_RS10705 | Not Available | Negative | 2347320 - 2348069 | 27206.6 |
| class i sam-dependent methyltransferase | C1O30_RS10710 | Not Available | Positive | 2348423 - 2349193 | 28210.2 |
| glycosyl transferase | C1O30_RS10715 | Not Available | Negative | 2349211 - 2350437 | 46955.8 |
| mannosyl-3-phosphoglycerate phosphatase-related protein | C1O30_RS10720 | Not Available | Negative | 2350457 - 2351290 | 30745.5 |
| hypothetical protein | C1O30_RS10725 | Not Available | Negative | 2351753 - 2352085 | 12689.4 |
| hypothetical protein | C1O30_RS10730 | Not Available | Negative | 2352109 - 2352405 | 10976.0 |
| duf3892 domain-containing protein | C1O30_RS10735 | Not Available | Positive | 2352560 - 2352850 | 10858.8 |
| is3 family transposase | C1O30_RS10740 | Not Available | Negative | 2352915 - 2353196 | 9842.63 |
| is3 family transposase | C1O30_RS21875 | Not Available | Positive | 2353661 - 2353996 | 12177.8 |
| rna polymerase sigma factor | C1O30_RS10750 | Not Available | Negative | 2354003 - 2354563 | 21117.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
