Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya zeae |
| Strain | MS2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1103787 bp
Thymine Count
1102832 bp
Guanine Count
1265585 bp
Cytosine Count
1267848 bp
Genome Length
4740052 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
151 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydga family protein | C1O30_RS10655 | Not Available | Negative | 2336237 - 2337790 | 56099.3 |
| mannose-6-phosphate isomerase | C1O30_RS10660 | Not Available | Negative | 2337847 - 2339031 | 42970.6 |
| class ii fumarate hydratase | C1O30_RS10665 | Not Available | Positive | 2339209 - 2340606 | 50132.5 |
| dna replication terminus site-binding protein | C1O30_RS10670 | Not Available | Negative | 2340610 - 2341536 | 35395.9 |
| mfs transporter | C1O30_RS10675 | Not Available | Negative | 2341703 - 2342947 | 44609.8 |
| lysr family transcriptional regulator | C1O30_RS10680 | Not Available | Positive | 2343085 - 2343999 | 34202.8 |
| rok family transcriptional regulator | C1O30_RS10685 | Not Available | Positive | 2344116 - 2345333 | 44392.0 |
| dethiobiotin synthase | C1O30_RS10690 | Not Available | Positive | 2345480 - 2346151 | 24308.4 |
| duf1161 domain-containing protein | C1O30_RS10695 | Not Available | Negative | 2346347 - 2346598 | 8944.78 |
| duf1283 family protein | C1O30_RS10700 | Not Available | Negative | 2346666 - 2347022 | 13329.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
